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3ZDZ

Integrin alphaIIB beta3 headpiece and RGD peptide complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID
Synchrotron siteAPS
Beamline23-ID
Temperature [K]100
Detector technologyCCD
DetectorMARRESEARCH
Spacegroup nameP 21 21 2
Unit cell lengths259.620, 144.470, 104.750
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.279 - 2.750
R-factor0.1848
Rwork0.184
R-free0.22110
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3t3p
RMSD bond length0.005
RMSD bond angle0.591
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHENIX
Refinement softwarePHENIX ((PHENIX.REFINE))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.820
High resolution limit [Å]2.7502.750
Rmerge0.1201.000
Number of reflections102899
<I/σ(I)>10.11.8
Completeness [%]99.8100
Redundancy6.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
18.911% PEG 8000, 0.2 M AMMONIUM SULFATE, 0.1 M TRIS-HCL, PH 8.9

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PDB entries from 2025-12-03

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