3X0G
Crystal structure of the ectodomain of African green monkey CD81 large extracellular loop (agmCD81-LEL)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU MICROMAX-007 HF |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2014-06-27 |
| Detector | RIGAKU SATURN 944+ |
| Wavelength(s) | 1.54 |
| Spacegroup name | P 21 2 21 |
| Unit cell lengths | 39.156, 39.700, 59.915 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 25.276 - 1.899 |
| R-factor | 0.232 |
| Rwork | 0.231 |
| R-free | 0.25430 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4BKH |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.163 |
| Data reduction software | XDS (package) |
| Data scaling software | XDS (package) |
| Phasing software | PHASER |
| Refinement software | PHENIX ((phenix.refine: 1.7.3_928)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 27.878 | 2.010 |
| High resolution limit [Å] | 1.899 | 1.900 |
| Rmerge | 0.064 | 0.485 |
| Number of reflections | 7580 | |
| <I/σ(I)> | 21.28 | 2.42 |
| Completeness [%] | 97.2 | 83.1 |
| Redundancy | 5.93 | 2.52 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 295 | 5% Ethanol, 5% MPD, 0.1M Tris pH 8.5, 200mM Sodium Chloride, VAPOR DIFFUSION, HANGING DROP, temperature 295K |






