3WZ4
Structure of the periplasmic domain of DotI (crystal form I)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 35 |
Detector technology | CCD |
Collection date | 2010-11-01 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.97923 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 145.590, 207.577, 58.179 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.425 - 2.200 |
R-factor | 0.1918 |
Rwork | 0.191 |
R-free | 0.23530 |
Structure solution method | SAD |
RMSD bond length | 0.003 |
RMSD bond angle | 0.635 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHENIX |
Refinement software | PHENIX ((phenix.refine: 1.7.1_743)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 54.000 | 2.320 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.127 | 0.321 |
Number of reflections | 88995 | |
<I/σ(I)> | 9.3 | 4 |
Completeness [%] | 98.4 | 94.6 |
Redundancy | 5.8 | 4.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 10.5 | 277 | 0.1M CAPS pH10.5, 40% MPD, VAPOR DIFFUSION, SITTING DROP, temperature 277K |