Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3WQ4

Crystal structure of beta-primeverosidase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU FR-E SUPERBRIGHT
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2006-05-31
DetectorRIGAKU RAXIS IV
Wavelength(s)1.54180
Spacegroup nameP 21 21 21
Unit cell lengths59.628, 88.796, 195.170
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution39.395 - 1.900
R-factor0.1612
Rwork0.159
R-free0.19470
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1cbg
RMSD bond length0.007
RMSD bond angle1.056
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwareMOLREP
Refinement softwarePHENIX ((phenix.refine: 1.8.3_1479))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.4002.000
High resolution limit [Å]1.9001.900
Rmerge0.0660.271
Number of reflections82106
<I/σ(I)>4.3
Completeness [%]99.6100
Redundancy3.53.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.529310mg/mL protein, 0.01% TritonX-100, 21% PEG 4000, 0.3M ammonium acetate, 0.1M sodium citrate (pH 5.5), VAPOR DIFFUSION, HANGING DROP, temperature 293K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon