3WGP
Crystal Structure Analysis of Vitamin D receptor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL40B2 |
Synchrotron site | SPring-8 |
Beamline | BL40B2 |
Detector technology | CCD |
Detector | ADSC QUANTUM 4 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 44.820, 51.390, 131.640 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 21.320 - 2.000 |
R-factor | 0.1688 |
Rwork | 0.167 |
R-free | 0.20660 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.010 |
RMSD bond angle | 0.920 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (2.7.5) |
Refinement software | BUSTER-TNT |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 32.910 | 32.910 | 2.110 |
High resolution limit [Å] | 2.000 | 6.320 | 2.000 |
Rmerge | 0.060 | 0.042 | 0.202 |
Total number of observations | 2366 | 11294 | |
Number of reflections | 21276 | ||
<I/σ(I)> | 16.5 | 26.6 | 6.5 |
Completeness [%] | 99.8 | 94.6 | 100 |
Redundancy | 3.9 | 3.3 | 3.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 |