3WBK
crystal structure analysis of eukaryotic translation initiation factor 5B and 1A complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-06-28 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.980 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 101.939, 120.942, 132.750 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.000 - 3.300 |
R-factor | 0.2613 |
Rwork | 0.257 |
R-free | 0.31730 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3wbi |
RMSD bond length | 0.008 |
RMSD bond angle | 1.306 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.420 |
High resolution limit [Å] | 3.300 | 7.100 | 3.300 |
Rmerge | 0.071 | 0.033 | 0.492 |
Number of reflections | 24875 | ||
<I/σ(I)> | 16.2 | ||
Completeness [%] | 98.5 | 94.4 | 92.9 |
Redundancy | 9.4 | 9.7 | 5.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.2 | 293 | 100mM Tris-HCl pH 8.2, 12.5%(w/v) PEG 3350, VAPOR DIFFUSION, SITTING DROP, temperature 293K |