3W6K
Crystal structure of dimer of ScpB N-terminal domain complexed with ScpA peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL26B2 |
Synchrotron site | SPring-8 |
Beamline | BL26B2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-02-01 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.0000 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 107.823, 88.919, 60.683 |
Unit cell angles | 90.00, 94.31, 90.00 |
Refinement procedure
Resolution | 46.476 - 2.374 |
R-factor | 0.2383 |
Rwork | 0.236 |
R-free | 0.28460 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Dimer of Geobacillus stearothermophilus ScpB N-terminal domain |
RMSD bond length | 0.009 |
RMSD bond angle | 1.296 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.420 |
High resolution limit [Å] | 2.374 | 2.374 |
Rmerge | 0.051 | 0.116 |
Number of reflections | 23087 | |
<I/σ(I)> | 37.406 | 11.464 |
Completeness [%] | 99.4 | 89.8 |
Redundancy | 3.8 | 3.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4 | 293 | 100mM Na malonate-HCl, 3.0-3.3M Na formate, pH 4.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K |