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3VRW

VDR ligand binding domain in complex with 22S-Butyl-2-methylidene-26,27-dimethyl-19,24-dinor-1alpha,25-dihydroxyvitamin D3

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE AR-NW12A
Synchrotron sitePhoton Factory
BeamlineAR-NW12A
Temperature [K]95
Detector technologyCCD
Collection date2010-10-11
DetectorADSC QUANTUM 210
Wavelength(s)1.000
Spacegroup nameC 1 2 1
Unit cell lengths154.210, 43.210, 42.380
Unit cell angles90.00, 95.49, 90.00
Refinement procedure
Resolution33.010 - 2.400
R-factor0.2197
Rwork0.218
R-free0.25640
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.017
RMSD bond angle1.478
Data reduction softwareMOSFLM
Data scaling softwareSCALA (3.3.16)
Phasing softwarePHASER (2.2.1)
Refinement softwareREFMAC
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]76.75133.0132.530
High resolution limit [Å]2.4007.5902.400
Rmerge0.0480.336
Rmeas0.0580.395
Rpim0.0320.206
Total number of observations9405088
Number of reflections10065
<I/σ(I)>10.222.53.2
Completeness [%]91.982.191.4
Redundancy3.53.13.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7293MES-Na, Na-Formate, PEG 4000, Ethyleneglycol, pH 7, VAPOR DIFFUSION, HANGING DROP, temperature 293.0K

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