3VOT
Crystal structure of L-amino acid ligase from Bacillus licheniformis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-09-24 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 58.090, 90.030, 154.910 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.460 - 1.800 |
R-factor | 0.1981 |
Rwork | 0.196 |
R-free | 0.24070 |
Structure solution method | MAD |
RMSD bond length | 0.007 |
RMSD bond angle | 1.159 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (CCP4_3.3.16) |
Phasing software | SOLVE (2.13) |
Refinement software | REFMAC (refmac_5.6.0117) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.010 | 30.010 | 1.900 |
High resolution limit [Å] | 1.800 | 5.690 | 1.800 |
Rmerge | 0.129 | ||
Total number of observations | 14924 | 54145 | |
Number of reflections | 73218 | ||
<I/σ(I)> | 9.7066 | ||
Completeness [%] | 96.4 | 99.23 | 90.46 |
Redundancy | 5.62 | 5.71 | 5.49 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 6.5 | 293.15 | 100mM CaCl2, 24-27%(w/v) PEGMME 550, 4%(v/v) isopropanol in 100mM imidazole, pH 6.5, VAPOR DIFFUSION, temperature 293.15K |
2 | VAPOR DIFFUSION | 6.5 | 293.15 | 100mM CaCl2, 24-27%(w/v) PEGMME 550, 4%(v/v) isopropanol in 100 mM imidazole, pH 6.5, VAPOR DIFFUSION, temperature 293.15K |
1 | VAPOR DIFFUSION | 6.5 | 293.15 | 100mM CaCl2, 24-27%(w/v) PEGMME 550, 4%(v/v) isopropanol in 100mM imidazole, pH 6.5, VAPOR DIFFUSION, temperature 293.15K |