Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3VKD

Crystal structure of MoeO5 soaked with 3-phosphoglycerate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSRRC BEAMLINE BL13B1
Synchrotron siteNSRRC
BeamlineBL13B1
Temperature [K]100
Detector technologyCCD
Collection date2011-08-10
DetectorADSC QUANTUM 315r
Wavelength(s)1.0000
Spacegroup nameP 1
Unit cell lengths46.778, 58.729, 59.242
Unit cell angles97.83, 112.62, 108.16
Refinement procedure
Resolution25.000 - 1.660
R-factor0.1638
Rwork0.158
R-free0.18710
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)pdb 3vk5
RMSD bond length0.020
RMSD bond angle2.000
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareCNS
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]25.0001.720
High resolution limit [Å]1.6601.660
Rmerge0.0350.086
Number of reflections59984
<I/σ(I)>39.911.4
Completeness [%]96.295
Redundancy44
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP629822% PEG 3350, 0.2M Na-malonate, 10mM MgCl2, 20mM 3-phosphoglycerate, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 298K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon