3VIN
Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with a new glucopyranosidic product
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL12B2 |
Synchrotron site | SPring-8 |
Beamline | BL12B2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-07-06 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.90000 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 93.152, 68.573, 75.638 |
Unit cell angles | 90.00, 95.61, 90.00 |
Refinement procedure
Resolution | 22.500 - 1.130 |
R-factor | 0.13617 |
Rwork | 0.135 |
R-free | 0.15626 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ahz |
RMSD bond length | 0.007 |
RMSD bond angle | 1.417 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.5.0109) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 22.500 | 1.170 |
High resolution limit [Å] | 1.130 | 1.130 |
Rmerge | 0.045 | 0.528 |
Number of reflections | 173272 | |
<I/σ(I)> | 28.7 | 2.4 |
Completeness [%] | 98.0 | 96.9 |
Redundancy | 4.5 | 4.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 298 | 0.1M Bis-Tris, 18-21%(w/v) PEG 3350, 0.1-0.25M MgCl2, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K |