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3VGA

Crystal structure of human adenosine A2A receptor with an allosteric inverse-agonist antibody at 3.1 A resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2010-03-07
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9795
Spacegroup nameC 1 2 1
Unit cell lengths120.313, 89.766, 110.682
Unit cell angles90.00, 96.14, 90.00
Refinement procedure
Resolution19.996 - 3.100
R-factor0.1992
Rwork0.196
R-free0.26330
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1vga
RMSD bond length0.008
RMSD bond angle1.278
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwarePHENIX ((phenix.refine: 1.7.1_743))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]71.2003.270
High resolution limit [Å]3.1003.100
Rmerge0.1090.636
Number of reflections18451
<I/σ(I)>5.31.5
Completeness [%]88.890.4
Redundancy2.32.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.529330% PEG 400, 0.1M MES, 0.2M magnesium chloride, 0.5% octhyl thioglucoside , pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K

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PDB entries from 2024-05-15

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