3VF4
Crystal structure of the O-carbamoyltransferase TobZ S530A variant in complex with carbamoyl phosphate and ADP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2011-08-26 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 99.247, 99.247, 280.444 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 29.304 - 2.400 |
R-factor | 0.1739 |
Rwork | 0.171 |
R-free | 0.22740 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ven |
RMSD bond length | 0.007 |
RMSD bond angle | 1.088 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.7.1_743) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.476 | 30.000 | 2.500 |
High resolution limit [Å] | 2.400 | 20.000 | 2.400 |
Rmerge | 0.119 | 0.320 | 0.451 |
Number of reflections | 32764 | 46 | 3640 |
<I/σ(I)> | 13.99 | 5.66 | 4.17 |
Completeness [%] | 99.4 | 78 | 98.2 |
Redundancy | 5.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 289 | 1.6 M sodium potassium tartrate, 0.1 M MES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 289K |