3VF2
Crystal structure of the O-carbamoyltransferase TobZ M473I variant in complex with carbamoyl phosphate and ADP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2011-08-24 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 99.160, 99.160, 280.919 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 29.336 - 2.900 |
R-factor | 0.1981 |
Rwork | 0.195 |
R-free | 0.25720 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ven |
RMSD bond length | 0.009 |
RMSD bond angle | 1.269 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.7.1_743) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.340 | 30.000 | 3.000 |
High resolution limit [Å] | 2.900 | 20.000 | 2.900 |
Rmerge | 0.148 | 0.052 | 0.421 |
Number of reflections | 18717 | 53 | 1763 |
<I/σ(I)> | 10.21 | 4.72 | 3.82 |
Completeness [%] | 98.5 | 89.8 | 98.6 |
Redundancy | 4.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 289 | 1.6 M sodium potassium tartrate, 0.1 M MES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 289K |