Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3VA5

Crystal structure of Staphylococcal nuclease variant Delta+PHS I92A/V23A at cryogenic temperature

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X25
Synchrotron siteNSLS
BeamlineX25
Temperature [K]100
Detector technologyPIXEL
Collection date2011-09-25
DetectorPSI PILATUS 6M
Wavelength(s)0.97950
Spacegroup nameP 1 21 1
Unit cell lengths31.179, 60.266, 38.100
Unit cell angles90.00, 94.78, 90.00
Refinement procedure
Resolution32.120 - 1.550
R-factor0.1793
Rwork0.175
R-free0.21850
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3bdc
RMSD bond length0.017
RMSD bond angle1.719
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHASER (2.2.1)
Refinement softwareREFMAC
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.580
High resolution limit [Å]1.5504.2101.550
Rmerge0.0660.0580.336
Number of reflections20327
<I/σ(I)>11.63.5
Completeness [%]98.298.385.9
Redundancy5.85.84.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP727720% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon