3V9I
Crystal structure of human 1-pyrroline-5-carboxylate dehydrogenase mutant S352L
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-11-16 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.979490 |
Spacegroup name | P 65 |
Unit cell lengths | 150.382, 150.382, 192.518 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 43.826 - 2.850 |
R-factor | 0.2106 |
Rwork | 0.209 |
R-free | 0.26400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3v9g |
RMSD bond length | 0.011 |
RMSD bond angle | 1.231 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.16) |
Phasing software | MOLREP |
Refinement software | PHENIX (1.7.1_743) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.784 | 47.690 | 3.000 |
High resolution limit [Å] | 2.839 | 9.010 | 2.839 |
Rmerge | 0.036 | 0.626 | |
Total number of observations | 5461 | 25737 | |
Number of reflections | 55880 | ||
<I/σ(I)> | 8.6 | 22.3 | 2.2 |
Completeness [%] | 97.5 | 90.6 | 99 |
Redundancy | 3.2 | 3.3 | 3.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | reservoir: 22.5% PEG3350, 0.2 M ammonium sulfate, 0.1 M HEPES, pH 7.5, cryoprotectant: 25% glycerol, VAPOR DIFFUSION, SITTING DROP, temperature 293K |