3UP9
Crystal structure of a putative lipoprotein (ACTODO_00931) from Actinomyces odontolyticus ATCC 17982 at 2.35 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.2 |
Synchrotron site | ALS |
Beamline | 8.2.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-09-09 |
Detector | ADSC QUANTUM 315 |
Spacegroup name | I 41 |
Unit cell lengths | 95.917, 95.917, 93.781 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.722 - 2.350 |
R-factor | 0.1589 |
Rwork | 0.157 |
R-free | 0.20480 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3tqw |
RMSD bond length | 0.017 |
RMSD bond angle | 1.963 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.20) |
Phasing software | PHENIX |
Refinement software | REFMAC (5.6.0117) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.722 | 29.722 | 2.410 |
High resolution limit [Å] | 2.350 | 10.510 | 2.350 |
Rmerge | 0.037 | 0.959 | |
Total number of observations | 965 | 6417 | |
Number of reflections | 17718 | ||
<I/σ(I)> | 7.8 | 18.5 | 0.8 |
Completeness [%] | 99.9 | 95.4 | 100 |
Redundancy | 4.9 | 4.8 | 4.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 20.00% polyethylene glycol 1000, 0.1M TRIS pH 7.0, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 293K |