3U7J
Crystal structure of Ribose-5-phosphate isomerase A from Burkholderia thailandensis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-10-06 |
Detector | RIGAKU SATURN 944+ |
Wavelength(s) | 1.541780 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 80.090, 73.470, 52.010 |
Unit cell angles | 90.00, 128.05, 90.00 |
Refinement procedure
Resolution | 47.860 - 2.100 |
R-factor | 0.162 |
Rwork | 0.160 |
R-free | 0.20700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ks2 |
RMSD bond length | 0.014 |
RMSD bond angle | 1.462 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.6.0117) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.150 |
High resolution limit [Å] | 2.100 | 9.390 | 2.100 |
Rmerge | 0.046 | 0.034 | 0.092 |
Number of reflections | 15098 | 160 | 814 |
<I/σ(I)> | 21.23 | 37.5 | 12.9 |
Completeness [%] | 94.8 | 91.4 | 78.9 |
Redundancy | 3.7 | 3.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 290 | Internal tracking number 225985D11. WIZARD 3/4 screen condition D11: 30%(w/v) PEG 5000 MME, 0.1M MES 6.5, 0.2M Ammonium sulfate. ButhA.00944.a.A1 PW33411 at 33.6 mg/ml. , VAPOR DIFFUSION, SITTING DROP, temperature 290K |