3TSK
Human MMP12 in complex with L-glutamate motif inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-02-01 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.87260 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 69.710, 63.060, 37.950 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 33.331 - 2.000 |
R-factor | 0.1655 |
Rwork | 0.162 |
R-free | 0.23174 |
Structure solution method | RIGID BODY REFINEMENT |
Starting model (for MR) | 3ts4 |
RMSD bond length | 0.018 |
RMSD bond angle | 2.220 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | REFMAC (5.5.0109) |
Refinement software | REFMAC (5.5.0109) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 33.330 | 33.330 | 2.110 |
High resolution limit [Å] | 2.000 | 6.320 | 2.000 |
Rmerge | 0.142 | 0.045 | 1.066 |
Number of reflections | 9572 | ||
<I/σ(I)> | 7.2 | 20.7 | 1.6 |
Completeness [%] | 83.9 | 79.5 | 80.9 |
Redundancy | 3.7 | 4.4 | 3.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 9.5 | 293 | MMP-12 at 0.4 mM co-crystallized with 100 mM AHA and compound QEG at 1 mM against reservoir solution: 27% PEG 10000, 100 mM Tris-HCl, pH 9.5. 24h in cryoprotectant to remove AHA. 70 MICRO-M compound QEG in 10% di-ethylene glycol, 10% 1.2-propanediol, 10% glycerol, 10% PEG 10K, 200 mM NaCl, 33.3 mM sodium acetate, 33.3 mM ADA, 33.3 mM bicine, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K |