3TSI
Structure of the parainfluenza virus 5 (PIV5) hemagglutinin-neuraminidase (HN) stalk domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 200 |
Detector technology | IMAGE PLATE |
Collection date | 2011-04-25 |
Detector | MAR scanner 300 mm plate |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 101.276, 101.276, 85.713 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 29.236 - 2.651 |
R-factor | 0.2037 |
Rwork | 0.202 |
R-free | 0.23790 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3t1e |
RMSD bond length | 0.006 |
RMSD bond angle | 1.088 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER (2.3.0) |
Refinement software | PHENIX (1.7.1_743) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 2.700 |
High resolution limit [Å] | 2.650 | 7.160 | 2.650 |
Rmerge | 0.057 | 0.038 | 0.382 |
Number of reflections | 14956 | ||
<I/σ(I)> | 15.2 | ||
Completeness [%] | 99.0 | 82.8 | 100 |
Redundancy | 5.4 | 4.5 | 5.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 298 | 4.5% Tascimate, 0.09 M HEPES, 9% PEG MME 5000, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 298K |