3TR8
Structure of an oligoribonuclease (orn) from Coxiella burnetii
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-05-17 |
Detector | RIGAKU SATURN 944 |
Wavelength(s) | 1.5418 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 117.656, 61.300, 58.094 |
Unit cell angles | 90.00, 112.41, 90.00 |
Refinement procedure
Resolution | 26.025 - 2.503 |
R-factor | 0.2105 |
Rwork | 0.207 |
R-free | 0.27550 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.013 |
RMSD bond angle | 0.725 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.7_650) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.540 |
High resolution limit [Å] | 2.500 | 6.780 | 2.500 |
Rmerge | 0.076 | 0.059 | 0.167 |
Number of reflections | 13189 | ||
<I/σ(I)> | 8.1 | ||
Completeness [%] | 98.3 | 96.5 | 76.1 |
Redundancy | 3.6 | 3.5 | 2.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 295 | 0.08M sodium cacodylate, 0.16M magnesium acetate, 16% PEG 8000, 20% glycerol, pH 6.5, vapor diffusion, sitting drop, temperature 295K |