3TNE
The crystal structure of protease Sapp1p from Candida parapsilosis in complex with the HIV protease inhibitor ritonavir
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.2 |
Synchrotron site | BESSY |
Beamline | 14.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Detector | RAYONIX MX-225 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 61.870, 61.610, 157.770 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.055 - 2.400 |
R-factor | 0.25697 |
Rwork | 0.254 |
R-free | 0.31673 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.016 |
RMSD bond angle | 1.687 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.16) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.5.0109) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.055 | 43.628 | 2.460 |
High resolution limit [Å] | 2.400 | 10.730 | 2.400 |
Rmerge | 0.056 | 0.388 | |
Number of reflections | 22587 | ||
<I/σ(I)> | 8.9 | 10.1 | 2 |
Completeness [%] | 92.5 | 97.2 | 99.9 |
Redundancy | 4.9 | 4 | 4.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 292 | 100-fold molar inhibitor excess, Cpr=20mg/ml; drops: 0.002ml protein + 0.001ml reservoir; reservoir: 0.1M MES pH 6.5, 30% v/v PEG 400, VAPOR DIFFUSION, HANGING DROP, temperature 292K |