Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3TA5

Cobalt bound structure of an archaeal member of the LigD 3'-phosphoesterase DNA repair enzyme family

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X25
Synchrotron siteNSLS
BeamlineX25
Temperature [K]130
Detector technologyPIXEL
Collection date2011-04-30
DetectorPSI PILATUS 6M
Wavelength(s)1.282
Spacegroup nameP 1 21 1
Unit cell lengths27.740, 58.400, 33.050
Unit cell angles90.00, 102.55, 90.00
Refinement procedure
Resolution24.565 - 1.520
R-factor0.1597
Rwork0.156
R-free0.18860
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3ph4
RMSD bond length0.009
RMSD bond angle1.297
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwarePHENIX
Refinement softwarePHENIX ((phenix.refine: dev_833))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]28.2401.600
High resolution limit [Å]1.5201.520
Number of reflections15703
<I/σ(I)>17.7
Completeness [%]98.898.8
Redundancy3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.5298Crystallization was carried out in hanging-drop vapor-diffusion setups with 1:1 mixtures of protein solution containing 0.7 mM Cko and 10 mM CoCl2 and reservoir solution containing 20% PEG 3350 and 0.2 M Na2HPO4 , pH 9.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon