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3T5L

Ternary complex of HNE Adduct modified DNA (5'-CXG-3' vs 14-mer) with Dpo4 and incoming dDGT

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-D
Synchrotron siteAPS
Beamline21-ID-D
Detector technologyCCD
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)1.08
Spacegroup nameP 21 21 2
Unit cell lengths95.124, 103.716, 52.816
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution27.190 - 2.900
R-factor0.204
Rwork0.204
R-free0.25500
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle1.400
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareCNS
Refinement softwareCNS
Data quality characteristics
 Overall
Low resolution limit [Å]30.000
High resolution limit [Å]2.600
Completeness [%]99.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION7.429850 mM Tris-HCl (pH 7.4 at 25 C) buffer, 12 20% polyethylene glycol 3350 (w/v), 100 mM Ca(OAc)2, and 2.5% glycerol (v/v). , VAPOR DIFFUSION, temperature 298K

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PDB entries from 2024-05-15

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