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3T37

Crystal structure of pyridoxine 4-oxidase from Mesorbium loti

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL38B1
Synchrotron siteSPring-8
BeamlineBL38B1
Temperature [K]100
Detector technologyCCD
Collection date2011-06-13
DetectorADSC QUANTUM 210
Wavelength(s)1.00
Spacegroup nameP 21 21 21
Unit cell lengths62.380, 79.438, 136.429
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution46.034 - 2.193
R-factor0.187
Rwork0.185
R-free0.22020
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3nne
RMSD bond length0.008
RMSD bond angle1.198
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Refinement softwarePHENIX ((phenix.refine: 1.7.3_928))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.0002.2802.240
High resolution limit [Å]2.1932.2402.200
Rmerge0.0730.0730.481
Number of reflections35380
<I/σ(I)>43.543.5
Completeness [%]99.898.898.8
Redundancy8.68.68.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.5293HEPES Na-salt (pH7.5) 0.1M, 2-Propanol 10%, PEG 4000 20%, VAPOR DIFFUSION, SITTING DROP, temperature 293K

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