Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

3SSD

DNA binding domain of restriction endonuclease bound to DNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsEMBL/DESY, HAMBURG BEAMLINE X11
Synchrotron siteEMBL/DESY, HAMBURG
BeamlineX11
Temperature [K]100
Detector technologyFLAT PANEL
Collection date2008-12-05
DetectorMAR555
Wavelength(s)0.81500
Spacegroup nameP 21 21 21
Unit cell lengths36.085, 67.189, 142.414
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.020 - 2.200
R-factor0.20199
Rwork0.196
R-free0.26221
Structure solution methodMR
RMSD bond length0.010
RMSD bond angle1.353
Data reduction softwareMOSFLM (6.2.6)
Data scaling softwareSCALA (3.2.19)
Phasing softwareMOLREP (9.2.10)
Refinement softwareREFMAC
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]29.03029.0302.320
High resolution limit [Å]2.2006.9602.200
Rmerge0.0700.0540.254
Number of reflections18339
<I/σ(I)>18.87.81.2
Completeness [%]99.896.899.9
Redundancy5.64.85.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1sitting drop6.82920.2 M LiCl, 18% PEG4000, pH 6.8, sitting drop, temperature 292K

246031

PDB entries from 2025-12-10

PDB statisticsPDBj update infoContact PDBjnumon