3SOO
Crystal structure of a LINE-1 type transposase domain-containing protein 1 (L1TD1) from HOMO SAPIENS at 2.73 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-04-21 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.91162,0.97932,0.97907 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 69.140, 69.140, 292.270 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.712 - 2.730 |
R-factor | 0.2275 |
Rwork | 0.226 |
R-free | 0.25930 |
Structure solution method | MAD |
RMSD bond length | 0.010 |
RMSD bond angle | 1.160 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SHELX |
Refinement software | BUSTER-TNT (2.8.0) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.712 | 48.712 | 2.880 |
High resolution limit [Å] | 2.730 | 8.630 | 2.730 |
Rmerge | 0.028 | 0.598 | |
Total number of observations | 2182 | 11721 | |
Number of reflections | 11913 | ||
<I/σ(I)> | 15.2 | 22.5 | 1.3 |
Completeness [%] | 99.8 | 96.7 | 99.9 |
Redundancy | 6.7 | 4.8 | 7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 277 | 0.2M potassium sodium tartrate, 2.0M ammonium sulfate, 0.1M sodium citrate pH 5.6, NANODROP', VAPOR DIFFUSION, SITTING DROP, temperature 277K |