Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3SDM

Structure of oligomeric kinase/RNase Ire1 in complex with an oligonucleotide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.3.1
Synchrotron siteALS
Beamline8.3.1
Detector technologyCCD
Collection date2008-01-09
DetectorADSC QUANTUM 315
Wavelength(s)1.115879
Spacegroup nameC 2 2 2
Unit cell lengths91.650, 580.670, 177.950
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution96.778 - 6.600
R-factor0.2875
Rwork0.286
R-free0.31700
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.006
RMSD bond angle0.925
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHENIX
Refinement softwarePHENIX ((phenix.refine: 1.5_2))
Data quality characteristics
 Overall
Low resolution limit [Å]96.778
High resolution limit [Å]6.600
Number of reflections9380
Completeness [%]99.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5300SODIUM CITRATE, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 300K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon