3SBK
Russell's viper venom serine proteinase, RVV-V (PPACK-bound form)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-07-14 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 1.0 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 77.233, 77.233, 168.433 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 28.740 - 2.550 |
R-factor | 0.2501 |
Rwork | 0.246 |
R-free | 0.32760 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3s9a |
RMSD bond length | 0.010 |
RMSD bond angle | 1.895 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.5.0109) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.640 |
High resolution limit [Å] | 2.550 | 2.550 |
Rmerge | 0.065 | 0.267 |
Number of reflections | 10311 | |
<I/σ(I)> | 33.8 | 15.8 |
Completeness [%] | 99.7 | 100 |
Redundancy | 20.4 | 21.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 9.6% PEG 3350, 0.8% tryptone, 40mM Na/HEPES , pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K |