3S9K
Crystal structure of the Itk SH2 domain.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2005-05-24 |
Detector | NOIR-1 |
Wavelength(s) | 1.2398 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 53.640, 57.360, 83.190 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.223 - 2.354 |
R-factor | 0.2375 |
Rwork | 0.233 |
R-free | 0.28270 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.263 |
Data reduction software | d*TREK (9.4LDz) |
Data scaling software | d*TREK (9.4LDz) |
Phasing software | PHASER (1.3.2) |
Refinement software | PHENIX (1.7.2_869) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.246 | 47.220 | 2.430 |
High resolution limit [Å] | 2.350 | 5.060 | 2.350 |
Rmerge | 0.094 | 0.070 | 0.347 |
Total number of observations | 3113 | 2342 | |
Number of reflections | 5487 | ||
<I/σ(I)> | 10.3 | 20.5 | 4.1 |
Completeness [%] | 97.8 | 93.5 | 93.1 |
Redundancy | 5.34 | 5.25 | 4.42 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.3 | 298 | 0.1 M Sodium citrate, 10 % iso-propanol, 20 % w/v PEG 4000, 2 mM DTT with 12.5 mM Glycyl-glycyl-glycine as an additive, pH 5.3, VAPOR DIFFUSION, HANGING DROP, temperature 298K |
1 | VAPOR DIFFUSION, HANGING DROP | 5.3 | 298 | 0.1 M Sodium citrate, 10 % iso-propanol, 20 % w/v PEG 4000, 2 mM DTT with 12.5 mM Glycyl-glycyl-glycine as an additive, pH 5.3, VAPOR DIFFUSION, HANGING DROP, temperature 298K |