3S93
Crystal structure of conserved motif in TDRD5
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-04-18 |
Detector | RIGAKU SATURN |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 42.940, 43.330, 126.600 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 27.480 - 2.280 |
R-factor | 0.246 |
Rwork | 0.245 |
R-free | 0.27100 |
Structure solution method | SAD |
RMSD bond length | 0.010 |
RMSD bond angle | 1.060 |
Data scaling software | XSCALE |
Phasing software | SOLVE |
Refinement software | BUSTER-TNT (BUSTER 2.8.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.340 |
High resolution limit [Å] | 2.280 | 2.280 |
Rmerge | 0.038 | 0.791 |
Number of reflections | 10833 | |
<I/σ(I)> | 33.8 | 2.8 |
Completeness [%] | 94.8 | 76.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 291 | crystal used for final refinement: 1.5 M ammonium phosphate, 0.1 M bis-tris propane. 1:200 trypsin was also added., pH 8.5, vapor diffusion, temperature 291K | ||
2 | 291 | Selenomethionyl derivative: 1.5 M ammonium phosphat e, 0.1 M bis-tris propane. 1:200 trypsin was also added., pH 7, vapor diffusion, temperature 291K | ||
3 | 291 | crystal used for preliminary refinement: 25 w/v% PEG-3350, 0.2 M lithium sulfate, 0.1 M bis-tris propane. 1:200 trypsin was also added., pH 6.5, vapor diffusion, temperature 291K |