3S93
Crystal structure of conserved motif in TDRD5
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU FR-E |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2011-04-18 |
| Detector | RIGAKU SATURN |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 42.940, 43.330, 126.600 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 27.480 - 2.280 |
| R-factor | 0.246 |
| Rwork | 0.245 |
| R-free | 0.27100 |
| Structure solution method | SAD |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.060 |
| Data scaling software | XSCALE |
| Phasing software | SOLVE |
| Refinement software | BUSTER-TNT (BUSTER 2.8.0) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 30.000 | 2.340 |
| High resolution limit [Å] | 2.280 | 2.280 |
| Rmerge | 0.038 | 0.791 |
| Number of reflections | 10833 | |
| <I/σ(I)> | 33.8 | 2.8 |
| Completeness [%] | 94.8 | 76.9 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | 291 | crystal used for final refinement: 1.5 M ammonium phosphate, 0.1 M bis-tris propane. 1:200 trypsin was also added., pH 8.5, vapor diffusion, temperature 291K | ||
| 2 | 291 | Selenomethionyl derivative: 1.5 M ammonium phosphat e, 0.1 M bis-tris propane. 1:200 trypsin was also added., pH 7, vapor diffusion, temperature 291K | ||
| 3 | 291 | crystal used for preliminary refinement: 25 w/v% PEG-3350, 0.2 M lithium sulfate, 0.1 M bis-tris propane. 1:200 trypsin was also added., pH 6.5, vapor diffusion, temperature 291K |






