3S03
The crystal structure of the periplasmic domain of Helicobacter pylori MotB (residues 97-256, P43).
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-04-08 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.87 |
Spacegroup name | P 43 |
Unit cell lengths | 71.669, 71.669, 126.236 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 71.670 - 2.500 |
R-factor | 0.2281 |
Rwork | 0.225 |
R-free | 0.28430 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 1.175 |
Data scaling software | SCALA (3.3.1) |
Phasing software | PHASER |
Refinement software | REFMAC (5.5.0072) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 71.670 | 71.611 | 2.640 |
High resolution limit [Å] | 2.500 | 7.910 | 2.500 |
Rmerge | 0.109 | 0.060 | 0.319 |
Total number of observations | 1972 | 9556 | |
Number of reflections | 18607 | ||
<I/σ(I)> | 7.6 | 9.9 | 2.4 |
Completeness [%] | 85.0 | 74.7 | 87.7 |
Redundancy | 3.5 | 3.8 | 3.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 293 | 100 mM citric acid pH 5.0, 0.8 M Ammonium sulphate, VAPOR DIFFUSION, SITTING DROP, temperature 293K |