3RZA
Crystal structure of a tripeptidase (SAV1512) from staphylococcus aureus subsp. aureus mu50 at 2.10 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-03-12 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.91162,0.97936,0.97911 |
Spacegroup name | P 1 |
Unit cell lengths | 46.996, 57.805, 79.857 |
Unit cell angles | 89.67, 73.38, 72.36 |
Refinement procedure
Resolution | 29.517 - 2.100 |
R-factor | 0.169 |
Rwork | 0.167 |
R-free | 0.21230 |
Structure solution method | MAD |
RMSD bond length | 0.016 |
RMSD bond angle | 1.398 |
Data reduction software | XDS |
Data scaling software | XSCALE (January 30) |
Phasing software | SHELX |
Refinement software | REFMAC (5.5.0110) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.517 | 29.250 | 2.160 |
High resolution limit [Å] | 2.100 | 4.490 | 2.090 |
Rmerge | 0.139 | 0.042 | 0.657 |
Number of reflections | 43307 | 8605 | 6269 |
<I/σ(I)> | 4.89 | 11.6 | 1.4 |
Completeness [%] | 88.6 | 94.4 | 73.4 |
Redundancy | 1.99 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.43 | 293 | 20.0% 2-propanol, 20.0% polyethylene glycol 4000, 0.1M sodium citrate - citric acid pH 5.43, Additive: 0.006 M zinc chloride, 0.006 M calcium chloride, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 293K |