3RYD
Crystal structure of Ca bound IMPase family protein from Staphylococcus aureus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 93 |
Detector technology | IMAGE PLATE |
Collection date | 2011-04-07 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 50.878, 68.046, 143.898 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.680 - 2.370 |
R-factor | 0.1945 |
Rwork | 0.190 |
R-free | 0.27840 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.015 |
RMSD bond angle | 1.663 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.9) |
Phasing software | MOLREP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 71.949 | 19.866 | 2.490 |
High resolution limit [Å] | 2.367 | 7.480 | 2.370 |
Rmerge | 0.040 | 0.621 | |
Rmeas | 0.043 | 0.674 | |
Rpim | 0.017 | 0.257 | |
Total number of observations | 4607 | 19403 | |
Number of reflections | 20973 | ||
<I/σ(I)> | 13.6 | 33.5 | 3.5 |
Completeness [%] | 99.2 | 94.4 | 95.9 |
Redundancy | 7 | 6.4 | 6.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 298 | 0.15M Sodium Potassium tartrate, 22%(w/v) PEG 3350, 0.1M HEPES pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K |