3RPE
1.1 Angstrom Crystal Structure of Putative Modulator of Drug Activity (MdaB) from Yersinia pestis CO92.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-04-14 |
Detector | MARMOSAIC 300 mm CCD |
Spacegroup name | P 32 |
Unit cell lengths | 66.497, 66.497, 76.208 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 28.800 - 1.100 |
R-factor | 0.10047 |
Rwork | 0.100 |
R-free | 0.11737 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2b3d |
RMSD bond length | 0.010 |
RMSD bond angle | 1.547 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.5.0102) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.120 |
High resolution limit [Å] | 1.100 | 1.100 |
Rmerge | 0.049 | 0.517 |
Number of reflections | 153499 | |
<I/σ(I)> | 33 | 2.95 |
Completeness [%] | 99.9 | 100 |
Redundancy | 5.6 | 4.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 295 | Protein: 7.8 mg/mL, 0.5 M sodium chloride, 5 mM FAD, 0.01 M Tris, pH 8.3, Screen: PACT (A2), 0.1 M SPG buffer, pH 5.0, 25% w/v PEG1500, VAPOR DIFFUSION, SITTING DROP, temperature 295K |