3RO4
X-ray Structure of Ketohexokinase in complex with an indazole compound derivative
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-BM |
Synchrotron site | APS |
Beamline | 17-BM |
Temperature [K] | 200 |
Detector technology | CCD |
Collection date | 2009-06-12 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 83.610, 86.034, 139.792 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.194 - 2.600 |
R-factor | 0.2608 |
Rwork | 0.258 |
R-free | 0.29700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3nbv |
RMSD bond length | 0.008 |
RMSD bond angle | 1.174 |
Data reduction software | d*TREK |
Data scaling software | d*TREK |
Phasing software | PHENIX |
Refinement software | PHENIX ((phenix.refine: 1.7_650)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.500 | 3.880 | 2.690 |
High resolution limit [Å] | 2.600 | 3.530 | 2.600 |
Rmerge | 0.088 | 0.102 | 0.408 |
Number of reflections | 30121 | ||
<I/σ(I)> | 9.1 | 10.7 | 2.6 |
Completeness [%] | 95.2 | 97.8 | |
Redundancy | 4.97 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 295 | 17% PEG 8k, 0.1M Na-Citrate, 0.2M Ammonium sulfate, pH 4.5, VAPOR DIFFUSION, SITTING DROP, temperature 295K |