3RKR
Crystal structure of a metagenomic short-chain oxidoreductase (SDR) in complex with NADP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | EMBL/DESY, HAMBURG BEAMLINE X13 |
Synchrotron site | EMBL/DESY, HAMBURG |
Beamline | X13 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-05-18 |
Detector | MAR CCD 165 mm |
Spacegroup name | I 4 2 2 |
Unit cell lengths | 243.167, 243.167, 151.549 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.418 - 2.420 |
R-factor | 0.1939 |
Rwork | 0.192 |
R-free | 0.22250 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2ehd |
RMSD bond length | 0.018 |
RMSD bond angle | 1.624 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | BALBES |
Refinement software | PHENIX ((phenix.refine: 1.7_650)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.700 | 2.550 |
High resolution limit [Å] | 2.420 | 2.420 |
Number of reflections | 85393 | |
Completeness [%] | 99.1 | 95.9 |
Redundancy | 5.6 | 5.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.5 | 293 | 1.5 M lithium sulfate, 0.1 M citric acid, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K |