3RIY
Sirt5 is an NAD-dependent protein lysine demalonylase and desuccinylase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CHESS BEAMLINE F1 |
Synchrotron site | CHESS |
Beamline | F1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-05-11 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 0.918 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 52.691, 69.417, 156.321 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.000 - 1.550 |
R-factor | 0.1461 |
Rwork | 0.144 |
R-free | 0.19130 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3rig |
RMSD bond length | 0.023 |
RMSD bond angle | 2.027 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.580 |
High resolution limit [Å] | 1.550 | 4.210 | 1.550 |
Rmerge | 0.066 | 0.046 | 0.398 |
Number of reflections | 83831 | ||
<I/σ(I)> | 13.1 | ||
Completeness [%] | 99.7 | 98.4 | 98.5 |
Redundancy | 7.1 | 6.7 | 5.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 16% PEG 4000, 6% Glycerol, vapor diffusion, hanging drop, temperature 298K |