3RAB
GPPNHP-BOUND RAB3A AT 2.0 A RESOLUTION
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 1997-12 |
Detector | MARRESEARCH |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 88.900, 35.000, 58.600 |
Unit cell angles | 90.00, 107.20, 90.00 |
Refinement procedure
Resolution | 8.000 - 2.000 |
R-factor | 0.191 * |
Rwork | 0.191 |
R-free | 0.23700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5p21 |
RMSD bond length | 0.007 |
RMSD bond angle | 24.200 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | X-PLOR (3.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 2.100 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.063 * | 0.197 * |
Number of reflections | 10595 | |
<I/σ(I)> | 17.1 | 6.3 |
Completeness [%] | 99.5 | 99.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, hanging drop * | 6.5 | 4 * | drop consists of equal volume of protein and reservoir solutions * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 15 (mg/ml) | |
2 | 1 | drop | Tris-HCl | 5 (mM) | |
3 | 1 | drop | 0.5 (mM) | ||
4 | 1 | reservoir | PEG8000 | 14 (%) | |
5 | 1 | reservoir | NaMES | 50 (mM) | |
6 | 1 | reservoir | 200 (mM) |