3R6V
Crystal structure of aspartase from Bacillus sp. YM55-1 with bound L-aspartate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-1 |
Synchrotron site | ESRF |
Beamline | ID14-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-11-28 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 0.9334 |
Spacegroup name | P 1 |
Unit cell lengths | 75.853, 118.960, 141.414 |
Unit cell angles | 89.93, 89.93, 76.42 |
Refinement procedure
Resolution | 39.730 - 2.600 |
R-factor | 0.1956 |
Rwork | 0.193 |
R-free | 0.25020 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1j3u |
RMSD bond length | 0.009 |
RMSD bond angle | 1.190 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.9) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.5.0102) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 141.414 | 48.601 | 2.740 |
High resolution limit [Å] | 2.600 | 8.220 | 2.600 |
Rmerge | 0.022 | 0.505 | |
Total number of observations | 9426 | 43899 | |
Number of reflections | 144679 | ||
<I/σ(I)> | 8 | 24.8 | 1.5 |
Completeness [%] | 97.9 | 98.2 | 97.4 |
Redundancy | 2.1 | 2.1 | 2.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 277 | 0.25 M NaSCN, 10 mM CaCl2, 0.1 M HEPES, pH 7.0, 20% PEG3350, vapor diffusion, hanging drop, temperature 277K |