3R13
Crystal structure of a Deoxyribose-phosphate aldolase (TM_1559) from THERMOTOGA MARITIMA at 1.83 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2005-03-31 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.89194,0.97946,0.97929 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 53.904, 52.481, 85.462 |
Unit cell angles | 90.00, 95.59, 90.00 |
Refinement procedure
Resolution | 44.677 - 1.830 |
R-factor | 0.1564 |
Rwork | 0.154 |
R-free | 0.19280 |
Structure solution method | MAD |
RMSD bond length | 0.016 |
RMSD bond angle | 1.432 |
Data reduction software | XDS |
Data scaling software | SCALA (3.2.5) |
Phasing software | SHELX |
Refinement software | REFMAC (5.5.0110) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 44.677 | 44.677 | 1.930 |
High resolution limit [Å] | 1.830 | 5.790 | 1.830 |
Rmerge | 0.094 | 0.034 | 0.552 |
Total number of observations | 5003 | 23040 | |
Number of reflections | 42195 | ||
<I/σ(I)> | 8.2 | 21.6 | 2.4 |
Completeness [%] | 100.0 | 99.7 | 100 |
Redundancy | 3.7 | 3.6 | 3.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 277 | 40.0% 1,2-propanediol, 0.05M calcium acetate, 0.1M acetate pH 4.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K |