3PUM
Crystal structure of P domain dimer of Norovirus VA207
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E+ DW |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2007-10-22 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 93.889, 96.241, 66.556 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 23.096 - 2.252 |
R-factor | 0.2256 |
Rwork | 0.225 |
R-free | 0.23240 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2obt |
RMSD bond length | 0.009 |
RMSD bond angle | 1.451 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.330 |
High resolution limit [Å] | 2.250 | 4.850 | 2.250 |
Rmerge | 0.067 | 0.031 | 0.296 |
Number of reflections | 27339 | ||
<I/σ(I)> | 15.7 | ||
Completeness [%] | 93.5 | 85.8 | 96 |
Redundancy | 3.9 | 4.1 | 3.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.3 | 289 | 12% (w/v) PEG 3350, 50mM magnesium formate, pH 7.3, VAPOR DIFFUSION, HANGING DROP, temperature 289K |