Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3PEV

S. cerevisiae Dbp5 L327V C-terminal domain bound to Gle1 and IP6

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.3.1
Synchrotron siteALS
Beamline8.3.1
Temperature [K]100
Detector technologyCCD
Collection date2010-01-23
DetectorADSC QUANTUM 315r
Wavelength(s)1.116
Spacegroup nameP 61 2 2
Unit cell lengths110.867, 110.867, 201.914
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution48.007 - 2.499
R-factor0.2039
Rwork0.202
R-free0.23810
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.004
RMSD bond angle0.708
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (1.6.4_486)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.590
High resolution limit [Å]2.5005.3802.500
Rmerge0.0940.0340.478
Number of reflections26030
<I/σ(I)>20.1
Completeness [%]99.399.894
Redundancy7.57.44.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.829130% PEG 3350, 100 mM HEPES pH 7.8, 200mM LiS04, 10mM HEPES pH 7.5, 150mM NaCl, 1mM DTT, 0.5 mM IP6, 5% glycerol , VAPOR DIFFUSION, HANGING DROP, temperature 291K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon