Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3PET

Crystal structure of a putative adhesin (BF0245) from Bacteroides fragilis NCTC 9343 at 2.07 A resolution

Experimental procedure
Experimental methodMAD
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL9-2
Synchrotron siteSSRL
BeamlineBL9-2
Temperature [K]100
Detector technologyCCD
Collection date2010-07-22
DetectorMARMOSAIC 325 mm CCD
Spacegroup nameP 21 21 21
Unit cell lengths38.590, 60.700, 205.110
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution45.392 - 2.070
R-factor0.1775
Rwork0.176
R-free0.21020
Structure solution methodMAD
RMSD bond length0.010
RMSD bond angle1.220
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareSHELX
Refinement softwareBUSTER-TNT (BUSTER 2.8.0)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]45.39245.3922.140
High resolution limit [Å]2.0704.4402.070
Rmerge0.1530.0480.814
Number of reflections3047057765397
<I/σ(I)>8.8523.42.2
Completeness [%]100.099.8100
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP3.852930.20M sodium chloride, 31.8% polyethylene glycol 300, 0.1M sodium acetate pH 3.85, NANODROP, temperature 293K, VAPOR DIFFUSION, SITTING DROP
2VAPOR DIFFUSION, SITTING DROP4.5277GNF2 E12: 0.20M sodium chloride, 40.0% polyethylene glycol 300, 0.1M sodium acetate pH 4.5, NANODROP, temperature 277K, VAPOR DIFFUSION, SITTING DROP

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon