3PET
Crystal structure of a putative adhesin (BF0245) from Bacteroides fragilis NCTC 9343 at 2.07 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-07-22 |
Detector | MARMOSAIC 325 mm CCD |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 38.590, 60.700, 205.110 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.392 - 2.070 |
R-factor | 0.1775 |
Rwork | 0.176 |
R-free | 0.21020 |
Structure solution method | MAD |
RMSD bond length | 0.010 |
RMSD bond angle | 1.220 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SHELX |
Refinement software | BUSTER-TNT (BUSTER 2.8.0) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.392 | 45.392 | 2.140 |
High resolution limit [Å] | 2.070 | 4.440 | 2.070 |
Rmerge | 0.153 | 0.048 | 0.814 |
Number of reflections | 30470 | 5776 | 5397 |
<I/σ(I)> | 8.85 | 23.4 | 2.2 |
Completeness [%] | 100.0 | 99.8 | 100 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 3.85 | 293 | 0.20M sodium chloride, 31.8% polyethylene glycol 300, 0.1M sodium acetate pH 3.85, NANODROP, temperature 293K, VAPOR DIFFUSION, SITTING DROP |
2 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 277 | GNF2 E12: 0.20M sodium chloride, 40.0% polyethylene glycol 300, 0.1M sodium acetate pH 4.5, NANODROP, temperature 277K, VAPOR DIFFUSION, SITTING DROP |