3OYV
Crystal structure of an imelysin peptidase (BACOVA_03801) from Bacteroides ovatus ATCC 8483 at 1.25 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-05-12 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.85503,0.97934,0.97911 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 104.427, 47.921, 83.914 |
Unit cell angles | 90.00, 124.62, 90.00 |
Refinement procedure
Resolution | 31.208 - 1.250 |
R-factor | 0.1333 |
Rwork | 0.132 |
R-free | 0.16300 |
Structure solution method | MAD |
RMSD bond length | 0.013 |
RMSD bond angle | 1.464 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SHELX |
Refinement software | REFMAC (5.5.0110) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 31.208 | 31.208 | 1.290 |
High resolution limit [Å] | 1.250 | 2.690 | 1.250 |
Rmerge | 0.055 | 0.034 | 0.522 |
Number of reflections | 93405 | 9571 | 7550 |
<I/σ(I)> | 12.79 | 32.3 | 2.2 |
Completeness [%] | 98.6 | 98.2 | 89.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 277 | 0.05M KH2PO4, 20.00% PEG-8000, No Buffer pH 4.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K |