3OW9
Structure of an amyloid forming peptide KLVFFA from amyloid beta, alternate polymorph II
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-06-09 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.9792 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 46.053, 9.561, 20.871 |
Unit cell angles | 90.00, 97.43, 90.00 |
Refinement procedure
Resolution | 22.830 - 1.800 |
R-factor | 0.2127 |
Rwork | 0.207 |
R-free | 0.25750 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.180 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER (2.1.4) |
Refinement software | BUSTER-TNT |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 90.000 | 90.000 | 1.940 |
High resolution limit [Å] | 1.800 | 3.080 | 1.800 |
Rmerge | 0.161 | 0.122 | 0.480 |
Number of reflections | 849 | ||
<I/σ(I)> | 4.5 | ||
Completeness [%] | 90.9 | 88.2 | 81.2 |
Redundancy | 3.2 | 3.4 | 2.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | reservoir contained 30% (v/v) Jeffamine M-600, 0.1M Mes pH 6.5 ; 0.05M CsCl, 1mM FDDNP, vapor diffusion, hanging drop, temperature 291K |