3OSO
Crystal structure of Staphylococcal nuclease variant Delta+PHS L25A at cryogenic temperature
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X25 |
Synchrotron site | NSLS |
Beamline | X25 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-01-25 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.0000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 31.143, 60.252, 38.013 |
Unit cell angles | 90.00, 94.94, 90.00 |
Refinement procedure
Resolution | 30.130 - 1.600 |
R-factor | 0.1709 |
Rwork | 0.167 |
R-free | 0.20588 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3BDC with all H20s Ca2+ and THP removed and the following truncations: H8A T13A L25A Q30A K64A Q80A T82A M98A Y113A V114A Y115A K116A Q131A K134A and K136A; all b-factors were reset to 20 A2. |
RMSD bond length | 0.018 |
RMSD bond angle | 1.780 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER (2.1.3) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 60.000 | 60.000 | 1.370 |
High resolution limit [Å] | 1.350 | 3.660 | 1.350 |
Rmerge | 0.050 | 0.029 | 0.583 |
Number of reflections | 27209 | ||
<I/σ(I)> | 15.8 | ||
Completeness [%] | 88.7 | 97.7 | 36.4 |
Redundancy | 6.6 | 7.3 | 3.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 277 | 25% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 7.0, vapor diffusion, hanging drop, temperature 277K |