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3ONS

Crystal structure of Human Ubiquitin in a new crystal form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X29A
Synchrotron siteNSLS
BeamlineX29A
Temperature [K]100
Detector technologyCCD
DetectorADSC QUANTUM 315
Spacegroup nameP 32 2 1
Unit cell lengths48.410, 48.410, 61.970
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution24.920 - 1.800
R-factor0.183
Rwork0.183
R-free0.21100
Structure solution methodSAD
RMSD bond length0.011
RMSD bond angle1.600
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareCOMO
Refinement softwareCNS (1.2)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0001.860
High resolution limit [Å]1.8001.800
Rmerge0.0710.311
Number of reflections8078
<I/σ(I)>17.78395.066
Completeness [%]98.899.7
Redundancy4.34.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.22772 ul of a 10 mg/ml protein solution was mixed with 2 ul of the reservoir solution (50-56 % MPD and 8-18 % (v/v) glycerol solution in 27mM sodium citrate (pH 4.0-4.2) buffer), VAPOR DIFFUSION, HANGING DROP, temperature 277K

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PDB entries from 2024-05-15

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