3OH6
AlkA Undamaged DNA Complex: Interrogation of a C:G base pair
Experimental procedure
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 77 |
Detector technology | CCD |
Collection date | 2009-04-15 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.91970 |
Spacegroup name | I 41 2 2 |
Unit cell lengths | 140.300, 140.300, 94.800 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.998 - 2.894 |
R-factor | 0.229 |
Rwork | 0.227 |
R-free | 0.26880 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1diz |
RMSD bond length | 0.006 |
RMSD bond angle | 1.044 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | CNS |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.000 |
High resolution limit [Å] | 2.894 | 6.240 | 2.900 |
Rmerge | 0.106 | 0.064 | 0.493 |
Number of reflections | 10809 | ||
<I/σ(I)> | 8.4 | ||
Completeness [%] | 99.8 | 98.6 | 100 |
Redundancy | 9.2 | 8.4 | 9.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | 25-29% peg3350, 100mM BisTris, 200mM Li2SO4, 3% 6-aminocaproic acid, pH 6.0-6.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K |