3NYV
Calcium-Dependent Protein Kinase 1 from Toxoplasma gondii (TgCDPK1) in complex with non-specific inhibitor WHI-P180
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRL BEAMLINE BL9-2 |
| Synchrotron site | SSRL |
| Beamline | BL9-2 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2009-06-18 |
| Detector | MARMOSAIC 325 mm CCD |
| Wavelength(s) | 0.97946 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 48.272, 72.297, 67.174 |
| Unit cell angles | 90.00, 103.61, 90.00 |
Refinement procedure
| Resolution | 43.220 - 1.880 |
| R-factor | 0.1751 |
| Rwork | 0.173 |
| R-free | 0.22180 |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | 3i7c |
| RMSD bond length | 0.013 |
| RMSD bond angle | 1.285 |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | REFMAC |
| Refinement software | REFMAC (refmac_5.5.0110) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 1.950 |
| High resolution limit [Å] | 1.880 | 4.050 | 1.880 |
| Rmerge | 0.048 | 0.023 | 0.481 |
| Number of reflections | 36621 | ||
| <I/σ(I)> | 13.4 | 32.19 | 2.29 |
| Completeness [%] | 99.2 | 99.8 | 92.8 |
| Redundancy | 4.2 | 4.2 | 4.1 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 298 | 27% PEG 3350, 0.275 M ammonium citrate, 5 mM DTT, 2.3 mM WHI-P180; frozen directly in LN2, pH 6.5, vapor diffusion, sitting drop, temperature 298K |






